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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs315766 chr5:169763975 A/C GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot
THYM rs315767 chr5:169763648 T/C GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot
THYM rs315772 chr5:169762079 G/C GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot
THYM rs315781 chr5:169755069 C/T GRLF1 chr19:47421933-47508323:+ 0.62 7.36 6.45E-11 Box Plot
THYM rs324128 chr6:44212311 T/C HSP90AB2P chr4:13335038-13340281:+ 0.59 8.04 2.48E-12 Box Plot
THYM rs33931652 chr5:176681797 TA/T LOC388955 chr2:63849182-63850159:- 0.84 12.19 3.83E-21 Box Plot
THYM rs34162554 chr17:44808342 C/CA LOC644172 chr17:43677491-43679748:- -0.82 -8.24 9.36E-13 Box Plot
THYM rs34162554 chr17:44808342 C/CA LRRC37A4 chr17:43578685-43595516:- 0.46 7.49 3.6E-11 Box Plot
THYM rs34206836 chr5:176607715 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs34374730 chr5:176565445 C/T LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs34446750 chr5:176595080 A/G LOC388955 chr2:63849182-63850159:- -0.84 -12.03 8.59E-21 Box Plot
THYM rs34583603 chr5:176689373 TG/T LOC388955 chr2:63849182-63850159:- 0.81 11.67 4.77E-20 Box Plot
THYM rs34601720 chr6:26660518 TG/T ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs34788039 chr5:176615510 A/AT LOC388955 chr2:63849182-63850159:- -0.72 -10.4 2.36E-17 Box Plot
THYM rs34832871 chr5:176655929 A/G LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot